Mostrando entradas con la etiqueta Calcio. Mostrar todas las entradas
Mostrando entradas con la etiqueta Calcio. Mostrar todas las entradas

viernes, 29 de marzo de 2013

Picking apart photosynthesis

ORIGINAL: RD Magazine
Fri, 03/29/2013

This illustration depicts a metal cluster prepared in the Agapie group on a background of photosystem II, the protein complex that performs photosynthesis in leaves. Image: Emily TsuiChemists at the California Institute of Technology (Caltech) and Lawrence Berkeley National Laboratory believe they can now explain one of the remaining mysteries of photosynthesis, the chemical process by which plants convert sunlight into usable energy and generate the oxygen that we breathe. The finding suggests a new way of approaching the design of catalysts that drive the water-splitting reactions of artificial photosynthesis.
"If we want to make systems that can do artificial photosynthesis, it's important that we understand how the system found in nature functions," says Theodor Agapie, an assistant professor of chemistry at Caltech and principal investigator on a paper in Nature Chemistry that describes the new results.

One of the key pieces of biological machinery that enables photosynthesis is a conglomeration of proteins and pigments known as photosystem II. Within that system lies a small cluster of atoms, called the oxygen-evolving complex, where water molecules are split and molecular oxygen is made. Although this oxygen-producing process has been studied extensively, the role that various parts of the cluster play has remained unclear.

The oxygen-evolving complex performs a reaction that requires the transfer of electrons, making it an example of what is known as a redox, or oxidation-reduction, reaction. The cluster can be described as a "mixed-metal cluster" because in addition to oxygen, it includes two types of metals—one that is redox active, or capable of participating in the transfer of electrons (in this case, manganese), and one that is redox inactive (calcium).

"Since calcium is redox inactive, people have long wondered what role it might play in this cluster," Agapie says.

It has been difficult to solve that mystery in large part because the oxygen-evolving complex is just a cog in the much larger machine that is photosystem II; it is hard to study the smaller piece because there is so much going on with the whole. To get around this, Agapie's graduate student Emily Tsui prepared a series of compounds that are structurally related to the oxygen-evolving complex. She built upon an organic scaffold in a stepwise fashion, first adding three manganese centers and then attaching a fourth metal. By varying that fourth metal to be calcium and then different redox-inactive metals, such as strontium, sodium, yttrium, and zinc, Tsui was able to compare the effects of the metals on the chemical properties of the compound.

"When making mixed-metal clusters, researchers usually mix simple chemical precursors and hope the metals will self-assemble in desired structures," Tsui says. "That makes it hard to control the product. By preparing these clusters in a much more methodical way, we've been able to get just the right structures."

It turns out that the redox-inactive metals affect the way electrons are transferred in such systems. To make molecular oxygen, the manganese atoms must activate the oxygen atoms connected to the metals in the complex. In order to do that, the manganese atoms must first transfer away several electrons. Redox-inactive metals that tug more strongly on the electrons of the oxygen atoms make it more difficult for manganese to do this. But calcium does not draw electrons strongly toward itself. Therefore, it allows the manganese atoms to transfer away electrons and activate the oxygen atoms that go on to make molecular oxygen.

A number of the catalysts that are currently being developed to drive artificial photosynthesis are mixed-metal oxide catalysts. It has again been unclear what role the redox-inactive metals in these mixed catalysts play. The new findings suggest that the redox-inactive metals affect the way the electrons are transferred. "If you pick the right redox-inactive metal, you can tune the reduction potential to bring the reaction to the range where it is favorable," Agapie says. "That means we now have a more rational way of thinking about how to design these sorts of catalysts because we know how much the redox-inactive metal affects the redox chemistry."


sábado, 1 de septiembre de 2012

De los músculos al computador

ORIGINAL: UdeA
por Elizabeth Cañas - Vicerrectoría de Investigación 
10 de august de 2012

Investigadores de la Alma Máter trabajan en un modelo computacional de la liberación y recaptura de calcio en los músculos. Los resultados servirán para el desarrollo de soluciones farmacológicas para problemas de fatiga y afecciones deportivas. 

Célula aislada del músculo extensor digitorum longus, de ratón.
Cortesía: Juan C. Calderón. Modelación fisicomatemática
La posibilidad de que un músculo esquelético se contraiga o no, depende de que las células musculares liberen iones calcio desde un compartimiento llamado retículo sarcoplásmico. La contracción muscular es un acortamiento que cuando el músculo está unido, por ejemplo, a un hueso, genera el movimiento.

“Lo que estamos modelando es ese proceso, mediante el cual sale el calcio y se une a los componentes de la célula. Para lograrlo, se apela a teorías físicas o modelos matemáticos para poder describir los procesos que hay entre los elementos y establecer un modelo computacional que facilite la reproducción de este proceso que se da al interior de las células”.

Así lo explicó Daniel Mejía Raigosa, estudiante del Instituto de Física de la Universidad de Antioquia, al señalar que se trata de un desarrollo innovador en Colombia en el que se combina la biofísica, es decir la unión de la biología y la física; así como los desarrollos de la fisiología muscular.

La investigación es su proyecto de grado que, además, se destaca por tratar de avanzar en la modelación de un proceso que ocurre en pocos milisegundos.

Según el estudiante, este proceso tiene como precedente la modelación y propagación del potencial de acción realizada después de la Segunda Guerra Mundial. En ese momento un Premio Nobel, Alan Lloyd Hodgkin, relacionó los impulsos eléctricos necesarios para conducir las señales nerviosas.

Próximamente se compartirán publicaciones científicas de esta investigación, que se adelanta gracias a la orientación de los profesores Marco Giraldo Cadavid, del Grupo de Biofísica, y Juan Camilo Calderón, del Grupo de Investigación en Fisiología y Bioquímica-PHYSIS, de la Facultad de Medicina, y expertos como el científico Carlo Caputo, del Instituto Venezolano de Investigaciones Científicas, IVIC.

Insumos científicos

La modelación para definir parámetros de relaciones entre los iones y proteínas, entre otros factores relacionales, combina las matemáticas, las leyes físicas y cálculos obtenidos de la toma de datos.

"Con ellos se busca reproducir los fenómenos que fueron medidos experimentalmente y los cambios que pueden generar el aumento o la disminución de la velocidad del proceso, la interacción que se presente el mismo y otras fluctuaciones. Se trata de avanzar en los estudios de movimientos moleculares, básicos para el desarrollo de opciones terapéuticas y para generar soluciones que modulen la salida del calcio", explicó Mejía.

Así comentó el profesor Giraldo Cadavid, al explicar que para lograr dicha reproducción se han realizado, previamente, por parte del profesor Calderón, una serie de mediciones de los cambios de fluorescencia inducidos por la liberación de calcio dentro de la célula muscular, y lo que se quiere es convertir las señales de fluorescencia a calcio y luego reproducir toda esa liberación de calcio en un computador.

Eso demanda que en forma computacional se tomen todos los elementos, se modele con ecuaciones y principios físicos que son traducirlos al lenguaje de computador, variando parámetros para entender bien el proceso, definir cuantos iones intervienen, su importancia y qué pasa si se varía la liberación de calcio, entre otros factores.

La investigación apela a la biología de sistemas, que consiste en describir o modelar un organismo o sistemas de organismos biológicos, no a nivel de componentes sino de sus interacciones.

Los sistemas que se estudian son fibras musculares de ratón, porque es más cómodo instrumentalmente y es un mamífero del que se pueden manipular fácilmente los músculos. Además, los ratones empleados hacen parte de cepas de laboratorio estandarizadas, para garantizar la reproductibilidad del experimento.

miércoles, 2 de mayo de 2012

Seawater key to early evolution

ORIGINAL: Cosmos Magazine
27 April 2012
by Anthony King

Evolutionary biologists have often pondered why life suddenly exploded into different forms 543 million years ago. Now, it seems seawater held the missing ingredient.

WHILE RIDING OVER THE Canadian Rockies in 1909, veteran geologist Charles Walcott discovered fossil gold among half-a-billion-year-old shale. These rocks contained evidence for all sorts of remarkable animals, and charted in great detail one of the enduring mysteries of evolution – the Cambrian explosion.

Trilobites were successful creatures during the Cambrian Explosion.
The Cambrian period began around 543 million years ago. Rocks from the time before that offer poor territory for any fossil hunter. There are few fossils and what is there is mostly microscopic or can be placed in the “could be a fossil” drawer. The Burgess Shale – around 505 million years old – belongs to a different era. Once you enter the Cambrian, you witness a sudden explosion of animals in the rocks. All sorts of exotic marine creatures appear, but also recognisable relatives of worms, arthropods and even vertebrates.

This sudden appearance of allied species troubled Charles Darwin, who could give no satisfactory answer to this “grave difficulty,” as he described it, in his book On the Origin of Species. Why would life suddenly proliferate? Where were their ancestors?

SCIENTISTS HAVE SINCE IDENTIFIED good candidates of early animal life before the Cambrian – from the Ediacaran Period. It gets its name for the Ediacara Hills in the Flinders Range of South Australia, where famous fossils from this time where found.

From that time, what we find consists mainly of evidence for soft-bodied organisms lying peacefully on algal mats; some it seems were grazers, while others were filter feeders, but many possibly just lived in symbiotic partnerships with the mats they were sitting on. Generally everything was quiet and peaceful, says palaeobiologist Peter van Roy of Ghent University in Belgium. So what happened to this tranquil, if dull world? What set off a period of innovation in shells, plates, spines and other skeletal elements?

Van Roy believes the entrance of a new profession into the food chains of these tranquil oceans – predation – had major repercussions. “If you introduce predators in such a system, these soft, docile creatures of course make an easy lunch. So animals need to protect themselves from predation.” Creatures are pushed into developing defensive behaviors and other ways to protect themselves – this is where hard mineralised shells, exoskeletons and armour come into play.

The predators can counter this move by developing sturdy, possibly mineralised implements. “Prey, in turn, has to respond to these new challenges, so you end up with a classical arms race between prey and predators,” says Van Roy.

It had been hotly contested whether a slow build of genetic traits set the ball rolling or whether a trigger from outside lit the fuse for the explosion of diversity. The idea that factors within ecosystems were responsible gained the upper hand over the last decade or so. Now, though, US scientists have come along and upended the apple cart.

US SCIENTISTS REPORT evidence of what ignited the Cambrian explosion of life. The chemistry of the seawater changed dramatically, they say, supplying a glut of raw material for shells, armour, exoskeletons, levers and mineralised parts. In support of their hypothesis, geologists Shanan Peters of the University of Wisconsin and Robert Gaines of Pomona College, California, reported in the journal Nature that what happened is evident in the “Great Unconformity,” a puzzling and very substantial gap in the sedimentary – and hence fossil – record in many locations. In effect, the approximately 525 million year old Cambrian rocks rest on much older rocks.

“It is better called the great non-conformity,” says Peters, “because it juxtaposes two different types of rocks.” The sequence was named by an explorer navigating the Grand Canyon for the first time. Here, near the base of the canyon, he noted a dramatic switch in rock type. Rocks below a line are crystalline and hard, formed within the Earth – igneous and metamorphic – while almost a mile of rocks above the line are layered sedimentary rocks deposited from the Cambrian on.

THE GREAT UNCONFORMITY records a transition from a world where the continental surfaces were being eroded and weathered over vast areas of the planet (below the line), to a world where the seas flooded back onto the continents and marine sediment once again began to accumulate. The pre-existing rocks broke down at the exposed surface over millennia, explains geologist Patrick Orr of University College Dublin, Ireland. It was primarily the residue that this produced that was flushed into the oceans as sea levels rose and flooded back onto the continents, he explains.

Peters and Gaines argue that the exposure and chemical weathering of these rocks released the materials which later fuelled the evolution of hard parts such as shells and armour.

Freshly exposed rock weathers chemically at rates more than three times faster than undisturbed soils, freeing up chloride, magnesium, iron, potassium, sodium, carbonate and calcium ions. Peters, and other geochemists, believe calcium levels may have been so high in the ocean that it posed a challenge for animal life, interfering with cellular functions. Converting ions of calcium into a mineral such as calcium carbonate, however, would put them out of harm’s way. Once you start precipitating a hard mineral in this scenario, evolution has something to work with.
“We argue that biomineralisation didn’t evolve for claws and things like that; it evolved in response to a change in ocean chemistry,” says Peters.

“Once there was an initial metabolic reason to make a biomineral, of course natural selection then could use it as a tool and that gets pushed rapidly by ecology. The functional capability afforded by biomineralisation gets picked up very quickly by natural selection as an advantage and that gives us the Cambrian explosion and the diversity and morphology that we see.”
It is possible, argues Peters, that before the weathering of the continents the supply of chemicals was too low and so it was expensive to make biominerals. Once you have biominerals, it becomes possible and advantageous to evolve shells, eyes and other parts made of calcite and ultimately bones.

TRILOBITES FOR INSTANCE were among the most successful of early animals. These arthropods – in the same group as insects and crustaceans – had hard exoskeletons made of calcite (calcium carbonate) minerals along with the protein chitin. An array of trilobites roamed the seas and crawled along the seafloor, watching their Cambrian world through remarkably capable calcite eyes.

What they were looking out for were perhaps hunters such as Anomalocaris, the bizarre apex predator of the Cambrian seas. This is believed to be the proud owner of the amazingly complex 515 million year old eyes reported last year from the Emu Bay Shale of South Australia. Each eye consisted of at least 16,000 individual lenses, rivalling the best eyes in modern arthropods in terms of sight. Improving eyes among prey and predator is a sign of one-upmanship in an evolutionary arms race.

Van Roy agrees that biomineralisation could have been one of the changes that set off the Cambrian explosion, arming predators and prey. However, Nick Butterflied of the University of Cambrige doubts that changes in ocean alkalinity could have acted as a trigger for the Cambrian explosion.

BIOMINERALISING ORGANISMS, HE ARGUES, represent a trivial percentage of marine diversity and especially in the Cambrian. “The Cambrian explosion would have happened even in the absence of biomineralisation” he believes. His views offer a foretaste of the battle to come.

“The explosive radiation of biomineralization organisms in the early Cambrian wasn’t just about calcification,” he says. “Skeletalisation had very little to do with ocean alkalinity and a lot to do with ecology.” Butterfield notes that carbonate biomineralisation was an innovation in the Ediacaran, well before the “great unconformity.” The trigger he believes is the evolutionary appearance of animals, which sets of a cascade of unprecedented shifts in ecosystem function and expression – including biomineralisation.

The pendulum had swung toward intrinsic ecological factors as driving Cambrian evolution, such as predator-prey relationships, but this paper marks a clear wakeup call that environmental factors must be considered too as drivers of evolution, says Orr. Moreover, the time before the Cambrian teemed with creatures too, but without durable minerals these animals were ill-quipped to survive in forms that could be collected by palaeontologists, he explains.

To muddy the waters further, many experts doubt that a single event caused the Cambrian explosion. Suggestions as to what caused or at least contributed to the explosion include

  • an increase in the oxygen level in the atmosphere to a level that would sustain large and complex organisms, 
  • changes in oceanic microplankton, 
  • the development of visual organisms and 
  • the rapid continental movements leading to large methane releases.
In their recent Nature paper, the US researchers point out that an expansion of shallow sea areas coincided with the Cambrian explosion, offering bountiful conditions for life to thrive.

“It is probably a combination of some of the various suggested mechanisms,” says Jim Jago, Cambrian expert at the University of South Australia. “It should also be remembered that the Cambrian ‘explosion’ took place over a period of at least 30 million years in the bottom part of the Cambrian.”
It is likely that various biological and non-biological factors influenced each other, some possibly triggering others in some cascade, and possibly reinforcing each other, agrees Van Roy. “The Cambrian explosion is a complex event that cannot be explained by a single trigger. You have several factors – biotic and abiotic – influencing and potentially mutually reinforcing each other.” Such a complex set of pieces to an evolutionary puzzle, judged from a distance of 500 plus million years, offers fertile ground for lively debate for years to come.

sábado, 28 de abril de 2012

¿Evitas los lácteos? Conoce otras alternativas para incorporar el calcio a tu organismo

ORIGINAL: EMOL

Por lo general se piensa en el queso y en el yogurt, pero también hay frutas, verduras, semillas y hasta peces que son ricos en este importante mineral.


"Toma leche, si no se te van a quebrar los huesos y se te van a caer los dientes" es la frase que comúnmente se les escucha decir a las madres a sus hijos, sobre todo si son niñas. Y tienen razón, ya que el calcio es muy importante para el bienestar del cuerpo.

Patricia Padrón, nutricionista de Clínica Las Condes, cuenta que este mineral -que frecuentemente se asocia a productos lácteos- es el más abundante del organismo. "Representa entre el 1,5 y el 2% del peso corporal, y el 39% del total de los minerales", afirma, y agrega que alrededor del 99% se encuentra en los huesos y dientes.

Por esta razón, es fundamental que las personas, especialmente las mujeres, incorporen el calcio a su dieta en raciones diarias que varían de la siguiente manera según cada etapa de la vida:
  • De 0 a seis meses: 210 mg.
  • De seis a 12 meses: 270 mg.
  • De uno a tres años: 500 mg.
  • De cuatro a ocho años: 800 mg.
  • De 9 a 18 años: 1.300 mg.
  • De 19 a 50 años: 1.000 mg.
  • De 51 en adelante: 1.200 mg.

Sin embargo, sólo consumir el calcio no basta para que éste se quede en el organismo. "La retención ósea del calcio que se deriva de alimentos y suplementos es limitada, a menos que se consuma junto con vitamina D o un suplemento que conserve los huesos", explica la especialista. Y esto ocurre especialmente en las personas de edad avanzada, razón por la cual siempre se habla de que la reserva del mineral se hace hasta los 20 o 21 años.


Patricia Padrón afirma que los lácteos son las principales fuentes de calcio, en especial si son descremados. Entre ellos se puede mencionar el yogurt, los quesos frescos, el quesillo, los quesos tipo cheddar, el queso cottage y la leche en polvo. El problema es que en la actualidad muchas personas evitan este tipo de alimentos, ya sea porque no les gusta su sabor, o bien son alérgicos o intolerantes a la lactosa. También caen en este grupo los vegetarianos estrictos y los veganos, es decir, quienes no usan ni consumen productos animales.

¿Cómo, entonces, pueden incorporar el calcio a su organismo? Menos mal existen otros productos que también son una buena fuente de este mineral, y que varían desde frutas y verduras, hasta semillas, peces y mariscos. De hecho, esta semana "The Huffington Post" publicó una lista con alimentos que para sorpresa de muchos son altos en calcio. Eso sí, el medio advierte -tal como lo hace la nutricionista de Clínica Las Condes- que, para mejorar su absorción, es importante combinarlos con un adecuado consumo de vitamina D. ¿Quieres conocerlos? Aquí están:
  • Col: si se considera que una taza tiene 90 mg de calcio, 3,5 tazas aportan incluso más del mineral que una taza de leche (300 mg aproximadamente).
  • Naranjas: son ricas en vitamina C y además una unidad de ellas contiene 60 mg de calcio.
  • Sardinas: una porción de 85 gramos aporta 325 mg si se consumen enlatadas en aceite y con sus huesos. Esto representa un 33% de la ingesta diaria de calcio recomendada.
  • Leche de soya: sin ser un lácteo, contiene 300 mg de calcio, casi tanto como la leche entera.
  • Avena: además de saciar y ser saludable para el corazón, tiene una cantidad significativa de calcio: un paquete de 35 mg aporta 105 mg del mineral.
  • Semillas de sésamo: 28 gramos contienen 280 mg de calcio.
  • Porotos de soya: una taza, hervidos sin sal, aporta 261 mg de calcio.
  • Almendras: además de ayudar a controlar el azúcar en la sangre, colaborar en la pérdida de peso y reducir el colesterol, una porción de 28 gramos de este fruto seco contiene 80 mg de calcio. Eso sí, hay que comerlas con moderación, porque también aportan grasa y calorías.
  • Salmón: es un pescado muy nutritivo, repleto de grasas saludables y proteínas. 85 gramos de él tienen 181 mg de calcio si se consume enlatado y con huesos. En tanto, al natural, un filete de tamaño regular tiene 24 mg del nutriente.
  • Porotos (Fríjoles) blancos: sólo media taza aporta alrededor de 100 mg de calcio.
  • Higos secos: sólo dos unidades ofrecen 55 mg de calcio. Además, son ricos en hierro y fibra.
  • Hojas de nabos: una taza aporta cerca de 200 mg de calcio. Así, si se agrega un poco más, se puede obtener una porción tan rica en calcio como una taza de leche.
  • Rúcula: una taza contiene 125 mg de calcio. De esta manera, si comes una ensalada preparada con tres tazas, estarás ingiriendo cerca de 400 mg del mineral.
  • Brócoli: una taza en cocido aporta 180 mg de calcio.
  • Tofu: una porción hecha con sulfato de calcio contiene un poco más de 250 mg del mineral.
  • Semillas de girasol: 28 gramos tienen 50 mg de calcio, lo que las convierte en un saludable snack.
  • PD: Como dice más arriba, la vitamina D ayuda a la absorción del calcio. La puedes encontrar en huevos (especialmente en la yema), pescados grasos (atún por ejemplo) o algunos mariscos (ostras, camarones o almejas). El sol también es una excelente fuente de vitamina D y, en último caso, la puedes obtener de suplementos alimenticios.